The Command-Line Tool is:
Having minimal packages / No debloated shi*. You get the stuff that's required for your site to run.
You get a full hold on your server like what you need and what you need. Better storage space handling and performance too.
There may be further points too but currently, I have only these ones in my mind...
There are many free hosting panels these days that can be deployed easily on the cloud servers and provides decent performance. In the end, it's about choice and needs.